Standard Available Services

Whole Genome Sequencing


Variant Analysis

To identify genomic variants (SNP/indels) comparatively. Usually involves comparing to a reference, also for cross sample comparisons.

Small Genome De Novo Assembly

For small genomes (bacteria, small eukaryotes), we can build a new assembly. This process is generally more straightforward for small organisms.

Large Genome De Novo Assembly

For larger genomes (human, mouse, most plants), this process is generally more iterative to build a new assembly.

Transcriptome Sequencing


RNA-seq Analysis

To identify genes that are differentially expressed between conditions, and potentially identify perturbed biological pathways.

Single Cell RNA Analysis

RNA-seq analysis at single cell clarity. This generally involves the 10X Genomics workflow for library preparations.

scRNA with additional flavors

Additional 10X Genomics scRNA-seq modalities such as feature barcoding, hashtagging, and VDJ sequencing.

Epigenetic Sequencing


ATAC-seq

To identify the open chromatin (unbound from nucleosomes) regions between conditions

scATAC-seq

ATAC-seq at single cell clarity using 10X Genomics library preparations.

scMultiome

10X Genomics scATAC with additional modalities, such as multiome.

Methyl-seq

To identify differentially methylated regions between conditions.

ChIP-Seq

To identify differential transcription factor binding between conditions.

Cut&Run

To identify differential binding sites of DNA-associated proteins between conditions.

Metagenomics Sequencing


16s Metabarcoding

Amplicon based metabarcoding to identify present bacterial populations.

Short Read Shotgun Metagenomics

Whole genome metagenomics using short reads technologies (Illumina)

Long Read Shotgun Metagenomics

Whole genome metagenomics using long reads technology (Nanopore)

Custom Projects


Where magic requests happen

Projects that can be customized to multiple applications, such as Ampli-seq, VDJ sequencing, tool development etc.